1- Alfredo A. Martinez-Morales, Nathaniel Portney, Yu Zhang, Giuseppe Destito, Gurer Budak, Ekmel Ozbay, Marianne Manchester, Cengiz Ozkan, Mihrimah Ozkan, “Synthesis and Characterization of Iron Oxide derivatized Mutant Cowpea Mosaic Virus Hybrid Nanoparticles”, Advanced Materials, 20, 1–5 (2008)

2- Zhang Y, Yang M, Portney NG, Cui D, Budak G, Ozbay E, Ozkan M, Ozkan CS.,
“Zeta potential: a surface electrical characteristic to probe the interaction of nanoparticles with normal and cancer human breast epithelial cells”, Biomed Microdevices.;10(2):321-8. (2008 April)

3- Budak GG, Muluk NB, Budak B, Oztürk GG, Apan A, Seyhan N., “Effects of intrauterine and extrauterine exposure to GSM-like radiofrequency on distortion product otoacoustic emissions in infant male rabbits”, Int J Pediatr Otorhinolaryngol;73(3):391-9. (2009 Mar, Epub 2008 Dec 23)

4- Budak GG, Budak B, Oztürk GG, Muluk NB, Apan A, Seyhan N., “Effects of extremely low frequency electromagnetic fields on transient evoked otoacoustic emissions in rabbits”, Int J Pediatr Otorhinolaryngol. ;73(3):429-36. (2009 Mar, Epub 2009 Jan 7)

5- Gurer G. Budak, Nuray Bayar Muluk, Bilgehan Budak, Goknur Guler Ozturk, Alpaslan Apan, Nesrin Seyhan, “Effects of Intrauterine and Extrauterine GSM-like Radiofrequency on Distortion Product Otoacoustic Emissions in Infant Female Rabbits”, The Journal of International Advanced Otology; 5:(2) 209-217. (May 2009)

6- Gürer G. Budak, Nuray Bayar Muluk, Bilgehan Budak, Göknur Güler Öztürk, Alpaslan Apan, Nesrin Seyhan, “Effects of GSM-like Radiofrequency on distortion product otoacoustic emissions of rabbits: Comparison of infants versus adults”, International Journal of Pediatric Otorhinolaryngology; 73, 1143–1147. (2009)

7- Jennifer Reiber Kyle, Michael D. Kyle, Ravi Raghavan, Gurer Budak, Cengiz S. Ozkan; Mihrimah Ozkan, “Analysis of light scattering from human breast tissue using a custom dual-optical scanning near-field optical microscope”, J. Biophoton. 3, 193–205 (2011)

8-Yu Zhang, Jennifer Reiber Kyle, Miro Penchev, Vahid Yazdanpanah, Jinjiang Yu, Yi Li, Mo Yang, Gurer Budak, Ekmel Ozbay, Mihrimah Ozkan, Cengiz S. Ozkan, “Transmission Near-Field Scanning Optical Microscopy Investigation on Cellular Uptake Behavior of Iron Oxide Nanoparticles”, J. BioNanoSci., DOI 10.1007/s12668-012-0043-8 (2012)

9-D. Arslantunali, G. Budak, V. Hasirci, “Multiwalled CNT-pHEMA composite conduit for peripheral nerve repair”, JJ Biomed Mater Res Part A DOI: 10.1002/jbm.a.34727. (2013)

10- Neslihan Cenk, Gurer Budak, Savas Dayanik, and Ihsan Sabuncuoglu, “Artificial Neural Network Modeling and Simulation of In-Vitro Nanoparticle-Cell Interactions”, J. Comput. Theor. Nanosci. 2014, Vol. 11, No. 1, doi:10.1166/jctn.2014.3348. (2014)

11- Elifnur Dogruoz, Savas Dayanik, Gurer Budak, Ihsan Sabuncuoglu, “Analysis of the in vitro nanoparticle–cell interactions via a smoothing-splines mixed-effects model”, J. Artificial Cells, Nanomedicine, and Biotechnology, 2015, ISSN: 2169-1401 print / 2169-141X online, DOI: 10.3109/21691401.2015.1011811 (2015)

12- Mehmet Budak, Gurer G. Budak, “A new biochemical dye molecule and nuclear stain formulation in histotechnology diagnostics as an alternative to hematoxylin”, Journal of Histotechnology, 2015, DOI 10.1179/2046023615Y.0000000009 (2015)